rs6367063 SNP Detail

Summary

• ID
  rs6367063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143105443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTCTTTT CTTACTGTGC
  AGCATGGGTC AAGTTACTTA GTCTCCTCGA CCTTGATTTT CTCTTTTGTA AAATGGACAC
  GGTGTATCCC TAACCTCATG TGACTGTTGC GGGGACTCAG TGGGACCTCG GATGCAGGGC
  ACGATGCAAG GGGTATGCCT CTGAGGTCCA TTTTGATTTC AGATTGAAGA CTGTGGAAGA
  Y
  GCCAGGGACC TACAGAGCCT GGCTTTCCTC CCTTTTAACG AAGAATGAGA ACCGTCCCTC
  AGGCAACTCC TGCCTGCTTC CCCCTGTCTC CTCTCCCCAC TAATGCCCTT TGAATTCTAT
  TGAGATCCTT CTCCTGAATT CTCTCTGCAC CAGTAAAGGA GAGACAGAGG GCTCGTGCCT
  CTCCCCAAGT CAGACAGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss8773179	WI_WGS_4_141154710	WI	MOUSE	f	SNP								T		C
ss37794121	NES09118238	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T		T		T	T	T	C		T	T	T	T
ss147782197	ENSMUSSNP4432280	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T								T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs6367063					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	C	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37794121	NES09118238	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143105443 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	481 bp proximal