rs6367041 SNP Detail

Summary

• ID
  rs6367041
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143105433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCTACACTGG
  GACaagagca aaggctctag agttgggatg ctcacagtgg gtgtgagcat cagctctntt
  cttactgtgc agcatgggtc aagttactta gtctcctcga ccttgatttt ctcttttgta
  aaatggacac ggtgtatccc taacctcatg tgactgttgc ggggactcag tgggACCTCG
  GATGCAGGGC ACGATGCANG GGGTATGCCT CTGAGGTCCA TTTTGATTTC AGATTGAAGA
  Y
  TGTGGAAGAN GCCAGGGACC TNNAGAGCCT GGCTTTCCTC CCTTTTAACG AAGAATGAGA
  ACCGTCCCTC AGGCAACTCC TGCCTGCTTC CCCCTGTCTC CTCTCCCCAC TNANGCCCTT
  TGAATTCTAT TGAGATCCTT CTNCTGAATT CTCTCTGCAC CAGTAAAGGA GAGACAGAGG
  GCTCGTGCCT CTCCCCAAGT CAGACAGAAG TCCTTATCTA GCTCTGAAAT GGTTCAGGCT
  TAAGAAACTT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
ss8773157	WI_WGS_4_141154700	WI	MOUSE	f	SNP			C	T
ss147782194	ENSMUSSNP3692768	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
rs6367041					SNP	C	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143105433 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	491 bp proximal