rs6366610 SNP Detail

Summary

• ID
  rs6366610
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:84199145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCAATTA TAGTTAGGTA
  GAACAGATTC AGGGCTGTCT ATAATTGTGT GGTAAGAAAA AAAAATGGAA TGAACCCTGT
  ATCTAAAAAT CTACATATAT ATTAGATAAA ATTCAAATTA ATAGATTCTA CTTTTAAAAG
  CACATGGAGA GAGATTTACA AACACTTGCT TGAAAACCAA TAAATATTTT AAAATATGTA
  R
  ATGAAAAATA TCTACACAAA TTTGCTAAAT GTTATTAAAA ACTTATAAGC CACATATTCT
  CTTATTTAAG GAATTAGAAG TCACATTGAA TCTTTAAGAT AATGCATTTA TTGATCTAGT
  TTATACTGTA TAGCATTATA TATTCAAAAT CGAATAATAC TCAGTGGTTT AGTTTACTCA
  AAATTAAATA CCTGATAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8772726	WI_WGS_2_85257485	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6366610					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84199145 () rs orientation: forward

Symbol	Name	Function Class
Calcrl	calcitonin receptor-like	Intron
Rr560240	regulatory region 560240	1735 bp distal
Rr560241	regulatory region 560241	489 bp proximal