rs6364745 SNP Detail

Summary

• ID
  rs6364745
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101126963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAGACCC GAGTAACATT
  TACTTGAGAA CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AGCAAAAAGA GTGCTTTCAA
  AGTCAAGCCC CCAAGCGCTT CACGGCTAAT CATGTGCCAA GTCACGTGGC TAGGACAATG
  ACAGGCAGGG TCGCTGTCCA CAAGACCTTT CAATTAGGTA GACTTCTCTC ATGTTTACAC
  Y
  CTTAATGGAG CTATGAATTA TCTTTGTTTA CTAGGATTAA GACATGATCT CATCTCAGTG
  ATTTAGAATA GCAATTGTCA ATATGGGTCT ACTCCCACTG ATGTCTTAGT ATAAAACCCT
  AAGATAACCA AATTCAGGCC AAGGGCTGTA AGTGAAGCAA GATGCCCAGC ATGTGTGGAA
  ATACTTTATT ATTTCCACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8770849	WI_WGS_3_101330904	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6364745					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101126963 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	430 bp proximal