rs6361709 SNP Detail

Summary

• ID
  rs6361709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101467690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTAATCCC CATAGCTATG
  TAACCCTCAT ATTCATGGGG TCTATTAGAA CACAGGCATC TTTGGATGTC ATCACTGTGT
  CTGTCAATCC TAAATATAGA AGTCCCAGTG TGGCAGGGCT TGTGAACATC AGGGATGGGA
  GGAGACATGA AAGAAACCAG TCATGAACTA GCTTCTTCTG AGTTGTGACC TTTTCATGTT
  R
  TTTATTAGAC AAAGGAGCCA GAGAGCAGCA AGTGAGTATT TGCTGTAGGG TTGATGTCAT
  GGACATGCAG AAGTGTGTAC AGAGAAGGCA CTGTCTGTAC TGTCCATGCA AAACACCCTT
  CAGAGCATCA TCCCCTTGGG CTCAATAGAC AGAACTGGAA GGAAAGGAAA GCTGGAAATG
  GTGTGTGTGT GTGTGTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss8767805	WI_WGS_3_101664649	WI	MOUSE	f	SNP		A	G
ss46433998	mCV24749380	ABI	CRAMUS_MOUSE	r	SNP	T			C
ss320852540	CHEV_3_101364297	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs6361709					SNP	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101467690 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	391 bp proximal