rs6360609 SNP Detail

Summary

• ID
  rs6360609
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101467481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCCTTTCTC TGTGATAACT CCAGCTGTGT CAAGTTGACA
  CAAAACTAAC CAATACAATA GCCAATATAA CCTTCCCATT TGAGGATCAT CTGATTATCA
  W
  CTTTAATACC TTAATCCCCA TAGCTATGTA ACCCTCATAT TCATGGGGTC TATTAGAACA
  CAGGCATCTT TGGATGTCAT CACTGTGTCT GTCAATCCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
ss8766704	WI_WGS_3_101664440	WI	MOUSE	f	SNP	T	A
ss320852537	CHEV_3_101364088	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
rs6360609					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101467481 () rs orientation: forward

Symbol	Name	Function Class
Rr582081	regulatory region 582081	600 bp proximal