rs6352830 SNP Detail

Summary

• ID
  rs6352830
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86987847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCTCCCA GTCTGTATGT
  GCTGCCGCAG ACCGCATCCA TGACCGAGCC CTACCGTGAT CACAGCAGCC TACTGAATCT
  AAGATGAGAG CAACACCAAT AACTTCATTT CACTCAGGGG TAGGGTGACA GACAAGATCA
  AGAAGTTGGT GGTTAAAGCT CCTTCTAGCA GGCTGTGCCT CCCTGCCCCA AGCCTCACCG
  M
  GACTGCTCAC TGTTCCCGAG GAATGGGCAA TCTCCTGCCC CAGATGAACA CAGCCAACAG
  AGAATAGGTT TAGGGAAAGA CCAGAAGATG GAAGCACGGA AAATAAGGAG GTCAGACCAG
  GGTTACTCAG CAAACAGCAG CCGCAGAATG GGATCCTGGA TCTCTCGACT CTTGGTTTCT
  TATTCTTTCA ACTAAAGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8758895	WI_WGS_3_87866605	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6352830					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86987847 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	mRNA-UTR
Rr579434	regulatory region 579434	1778 bp proximal
Rr579435	regulatory region 579435	1863 bp proximal