rs6351856 SNP Detail

Summary

• ID
  rs6351856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86987692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CACTAACCCC
  TTCTTCCTGC TAGGAACACC CCTTTCAGTC TACAGGGCGG GGTCAGCTGC TCTCTCTCCT
  GCTTTCTGAT TCAAGACTGC AGGGAGGGGG GCACGGGCGG GGGGGATGTA GGCTTCACCT
  TGTTGGGGGA ACAGGGAGAG CAGTCTTTAG GCCAGATGAC TGTTCCTGAA GACTGAAGTA
  GAAGACAGTT TCTCTGCCTC TCCCAGTCTG TATGTGCTGC CGCAGACCGC ATCCATGACC
  R
  AGCCCTACCG TGATCACAGC AGCCTACTGA ATCTAAGATG AGAGCAACAC CAATAACTTC
  ATTTCACTCA GGGGTAGGGT GACAGACAAG ATCAAGAAGT TGGTGGTTAA AGCTCCTTCT
  AGNAGGCTGT GCCTCCCTGC CCCAAGCCTC ACCNNGACTG CTCACTGTTC CCGAGGAATG
  GGCAATCTCC TGCCCCAGAT GAACACAGCC AACAGAGAAT AGGTTTAGGG AAAGACCAGA
  AGATGGAAGC                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8757920	WI_WGS_3_87866450	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6351856					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86987692 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	mRNA-UTR
Rr579434	regulatory region 579434	1933 bp proximal