rs6348781 SNP Detail

Summary

• ID
  rs6348781
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37781445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTC TCCTTTGCCT TCCCCTCCCT
  Y
  GCCTTTAGTT CCTGCCTATG TGGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss8754836	WI_WGS_3_37612741	WI	MOUSE	f	SNP		C	T
ss134812109	ENSMUSSNP3347409	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
ss320712097	CHEV_3_37626218	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs6348781					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37781445 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575551	regulatory region 575551	204 bp distal
Rr575552	regulatory region 575552	834 bp proximal
Rr575553	regulatory region 575553	1848 bp proximal