rs6347673 SNP Detail

Summary

• ID
  rs6347673
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37781233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACA TTTCCAATGC ATACTGAACC
  Y
  ATTTACATAT TAAGAACATT CTAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss8753726	WI_WGS_3_37612529	WI	MOUSE	f	SNP		C	T
ss45394287	mCV24774607	ABI	CRAMUS_MOUSE	f	SNP	C		T	C
ss46914029	NES10824108	PERLEGEN	MM_PANEL2	f	SNP					T	T		T	C
ss134812097	ENSMUSSNP3887398	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
ss320712094	CHEV_3_37626006	CHEVERUD	SCREENING_POP	f	SNP							C			C
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs6347673					SNP	C	C	T	C	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46914029	NES10824108	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37781233 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575551	regulatory region 575551	within coordinates
Rr575552	regulatory region 575552	1046 bp proximal