rs6345648 SNP Detail

Summary

• ID
  rs6345648
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:118013733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGTAGGT CCATGCTGTC
  ATTAACTCTC ATGTGACAAA GGGCACACTG GAGCTGTTCC ACATCCAGAC TCGCCTGGCT
  TAATAAACAA AGCCAAGAGT CAGACCTGGT TCTGCCTAGT CCCCACTATG CCATATGCAT
  GTCACTGTGA GCAGACACTG TGGGATGCTC CAGGATGCTC CAACATGCAG GTGAACCGGG
  W
  ACTCCCCGGC CTCCTCCCAT TGGCTGTGGG TCAAGGGGTG GGGTCTACTC CTGCATTTGT
  CCTAAGTGCA TGAAAATTGG ATAGCTCAGC CCTGACATTC CCTGGGCTCC ACACTAAAAA
  CGCCCACTCC CTGCTGATCA CGCAGGACTC TAACATTCAG CTTGTGTTAG CCAAACCACC
  CAAATGCATT CTTTGAACAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8751699	WI_WGS_5_115872564	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6345648					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118013733 () rs orientation: forward

Symbol	Name	Function Class
Gm30360	predicted gene, 30360	within coordinates
Nos1	nitric oxide synthase 1, neuronal	Intron
Rr618744	regulatory region 618744	1556 bp distal