rs6345218 SNP Detail

Summary

• ID
  rs6345218
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73637004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAAGAAAG ACCTGAGTTG
  TATTCCTGGA ACCCACATGG TGGAAGGAGA GAACTGATGC CCAAAAGTTG TCCACACAAT
  AAATAAATAA ATACATAAAT AAATGTTATA GTGAAAGTTC TGATTTCCTT AAAAACCACA
  AAAACATTAT AAGAATGTTT TTGTTTTAAT ACCAGGTATT GATGGGGCTG CTTCACAGCA
  R
  CTGACTATGA TTTGCCTCGT GCTCTAGCGG AGGCGTGATT TCTATGCCAG CTACAGATAG
  TTCCTGAGAG TGTGTGACAT TTGGGATTCC AGAGACTCTT CAGGTGGTAT ATAAATGCTA
  GAGGCAGGGA AGGATGTTGT TGTTGGATTA TTGGTTGGTG GTTGGTTGCT ATTGGTCTTG
  GTTTGCTAAG TAGTTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8751268	WI_WGS_2_74661243	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6345218					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73637004 () rs orientation: forward

Symbol	Name	Function Class
Rr559238	regulatory region 559238	1178 bp proximal