rs6344688 SNP Detail

Summary

• ID
  rs6344688
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73636939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAGGCCA AAGCCTTTCC
  CAGCTGGTGA GATGGCTCAT AGGGTAAAGA CATTATCTAA CAAACCTAAA GAAAGACCTG
  AGTTGTATTC CTGGAACCCA CATGGTGGAA GGAGAGAACT GATGCCCAAA AGTTGTCCAC
  ACAATAAATA AATAAATACA TAAATAAATG TTATAGTGAA AGTTCTGATT TCCTTAAAAA
  M
  CACAAAAACA TTATAAGAAT GTTTTTGTTT TAATACCAGG TATTGATGGG GCTGCTTCAC
  AGCAACTGAC TATGATTTGC CTCGTGCTCT AGCGGAGGCG TGATTTCTAT GCCAGCTACA
  GATAGTTCCT GAGAGTGTGT GACATTTGGG ATTCCAGAGA CTCTTCAGGT GGTATATAAA
  TGCTAGAGGC AGGGAAGGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8750736	WI_WGS_2_74661178	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6344688					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73636939 () rs orientation: forward

Symbol	Name	Function Class
Rr559238	regulatory region 559238	1243 bp proximal