rs6343665 SNP Detail

Summary

• ID
  rs6343665
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:21895248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTATAACT
  GTATGTGTGT GTATGTGTTT TTGTGTGTAA CTGTGTGTGT GTGTCTGTGT CTGTATGTAT
  ATTAATGTGC ATGTAGAGGG CAGAAGACAA ACTAAGATCC ATTTTTTGTT GTTATTTTTG
  TTGCTGTTAT TGTTTGTTTA TTTTGTTTTG AGACAAGGTT TCTCTTTGGC CTGGAGCTTG
  Y
  TAATTAGACC AGATTGAACA CCCAGAGAGC CTTAGGGATC CCTCTATCTC CACCTCCCTG
  TGCTGTGATT ACAAACATAT ACAACTACAC CTGCCTCTCC ACATGTGTAC TGGGGTTAGA
  ACTCATGCAT ATGAAACAAG CACTTTGGCT GACTCAGCTA TCTCTCCAAC CCTCAAAACA
  GTCGCTTAAT ACTAAATAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8749706	WI_WGS_6_21840107	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6343665					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:21895248 () rs orientation: forward

Symbol	Name	Function Class
Gm68065	predicted gene, 68065	within coordinates
Rr627026	regulatory region 627026	418 bp distal