rs6341221 SNP Detail

Summary

• ID
  rs6341221
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98107630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTTACAC CAGACCCCCC
  CCCCAAAAAA AAATCAGCAC AGAGAAGGCA AAGCAGGAAT GAAATCCTAT CGCTAGCCAA
  GGAGCTACTT GAAAATTATA GTTTCTGGGA GAGGGAAAAT CAGTTTTCTC TAATGACACA
  ACACTGAATA TATCAACCCC ACTCCAAGTC AGGCCTCATG CTCAGGAGTA GTTGACCAAT
  R
  AAACAATCTC CATGATTTTT TGGTGCTTTG TTTTGTTTTG AGTTTGGGTG GCTTTTTTTG
  TTTTAAAGAA AAAAAAATAA CATGAAGTTG GGTGTGGGGA AGATCTGGAG AGAGTTAGAA
  GGTGTGAAAG AATATGATCA AAATATATCA TACAAAAAAA CTTTTCAAAA CAAATTTAAA
  AATAAAAGAG TGTAATAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8747253	WI_WGS_4_95983718	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6341221					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98107630 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr595710	regulatory region 595710	1949 bp proximal