rs6336947 SNP Detail

Summary

• ID
  rs6336947
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8242093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCATATGTA ATGGGATCTG
  ACCCTCTCTT CTGGTGTGTC TGAAGACAGC TACAGTGTAC TCATATACAT AAAATAAGTA
  AATAAATCTT TGTTTTAAAA AAATAAAAAG ATAACAAGGT TCTTTTCTGG TCACTGTCTT
  ACCTGGCAAA GTTTTGTTTG TTTTCAGGGA GCATTGCAAA ACCTTAGTTT GGAGGAAGAA
  M
  AGGACTATAC TTGTTCAAGA ACTTAGCATT TCTGATTCTT CTGGGCTTTC GGAGACTGTT
  CTTGCTACTT ACACCAGAAT TCCTCCTACC TCAGTATTCT GAGTACTGGG ATTGCAGGTT
  TGTTTTTCTT TCGTTTGTCA CTGTCACGTT GTATGACACG CAAATGTATG AAACCCTGCA
  ACTTGTATGG TGAGGAATAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	MSM/Ms
ss8742971	WI_WGS_6_7995557	WI	MOUSE	f	SNP			A	C
ss132964802	ENSMUSSNP2526494	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	MSM/Ms
rs6336947					SNP	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8242093 () rs orientation: forward

Symbol	Name	Function Class
Rr626362	regulatory region 626362	1097 bp distal