rs6335018 SNP Detail

Summary

• ID
  rs6335018
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145324789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAACTGAC ATTTTCCCAC
  AGTGTCTCTA GCTCTAGATG GCTACTGTCC CCTGGGTGTT GTATACCTGA CCACATCTAC
  TCTTAAAGGA AATCTAAGCC TCAAAATGTG AGCAGTCTTT GACTTGAGAA TCTTCTGCCT
  GGGCTCATCC ACTGTTCTAT GTCGCTGTCT GCTTGAAGGT TGGACACGGA GCACTTGCTT
  Y
  GCCCTCCCAT GCCACTTCTG ACCACGTGTG ACTCTACTGA GTCCCCTGTT GGCAAATGGC
  CAATCTTTAC CCATTTGCTC AATCAAAGAG GAGGAGGAGG AAGAAGGCGA TTTCTTGCTT
  TCACGTGCCC CTTCTTTCAG CTCTCACATC TACCTCAGAC ATGGTCTTTC CCCCAGAATG
  TACTAAAAGC ATCCAGTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8741033	WI_WGS_3_146155670	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6335018					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145324789 () rs orientation: forward

Symbol	Name	Function Class
Rr586799	regulatory region 586799	243 bp distal