rs6333968 SNP Detail

Summary

• ID
  rs6333968
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145324572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGGAGTGGG TGGAAACTAG
  ATTGTGTGGC CACTTCTCCG CCCTTCCCCA GACAAGGGCC GGGGTTTGTC ACAGTGCAAT
  CTCTTGACAT CCCTCAGAAA CACAATGCTA ACAAGTATAC CAACAACCAC AAGTATCCAC
  TAAATAGGCC TGGAGGAAGG AACCCAGGCT GCACGTCAGC GCCAGCCAGG GAGTCAAGCA
  R
  TCTTTTGAAC TCTTAACTAA ACTGACATTT TCCCACAGTG TCTCTAGCTC TAGATGGCTA
  CTGTCCCCTG GGTGTTGTAT ACCTGACCAC ATCTACTCTT AAAGGAAATC TAAGCCTCAA
  AATGTGAGCA GTCTTTGACT TGAGAATCTT CTGCCTGGGC TCATCCACTG TTCTATGTCG
  CTGTCTGCTT GAAGGTTGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8739980	WI_WGS_3_146155453	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6333968					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145324572 () rs orientation: forward

Symbol	Name	Function Class
Rr586799	regulatory region 586799	26 bp distal