rs6332746 SNP Detail

Summary

• ID
  rs6332746
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151794994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CACAGGATAT
  TAAGCACAAT CATTCCGGCA GCGCTCCACC AGTCAGCGCC TCTCCGGGTT AGTGGAACCT
  GGGCTGATTT TGGTAGAATT TGTCATCAGC CTCAATACTC TCAGAGACAC CAAGTGCAGT
  CCCCAAGGCT CAGAAGAGTA GCTGAGTATC AGAGACACTT TAGCTGTCAC CTGGCTGTGC
  TTAAGAATCA GACTAGACAG GCCAGAATGA AGACTACACC AAACACCTGA CAGACCTATC
  S
  GANTCACAAG GGAAAGAAAG GCAGCTTCGA GGTGGCAGCC CGTGCAGGTA GTGCCACCTA
  CTGGTCAGAC GAGGTAGAAA ACAAAAAGCA GGGTTGGCCC ACCTGGGCCA TGAAATGAGA
  TAGGCTCACC TGGATGAGCC TACCTGGAAG ACAGTTAATT CACTTTCATG tattattatt
  gttattatta ttaCATTTAA TGTTTAATTT GATATTATTG TTATTATATT ATTATGACAG
  TTCATTCACT                                                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8738750	WI_WGS_3_152677411	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6332746					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151794994 () rs orientation: forward

Symbol	Name	Function Class
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	within coordinates
Rr587444	regulatory region 587444	48 bp proximal