rs6331844 SNP Detail

Summary

• ID
  rs6331844
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:99035018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAAAATG CAGTGAAAAA
  AGTATGGTGA TCCATTTCTA AGTATTTGTG TAAATTATTC TCTTGCCAGC ACTTTCCCTT
  TCTGTCCCCA CCCCCTTTCT TTCTTTACTG TTTATGTCAG ATAGGAAGTA GCAACATGCT
  CTGACTAGTG TAAGCTGAAA CCAACTTCAT TTTTTATTTA ATTTGTAATT TAACTTTAAG
  R
  TGTTTCATTT TTGTTTTAGA TTTATTTTAT TTTATTTTAT ACGGATGAGT GTTTTTGCTT
  GCATGTATGT GTGCTGAATG TACAAGTGCC TAGTATCTGC AGAGGCCAGA AGAGGGTGCT
  AGATCCCCTG GAACTAGAGG TATAGAAGAT TATAAGCTAC CATGTGGGTG CTGGTAATCG
  AACCTGGGTC CTCTACAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8737846	WI_WGS_4_96933454	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6331844					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:99035018 () rs orientation: forward

Symbol	Name	Function Class
Gm12681	predicted gene 12681	133 bp downstream
Rr595831	regulatory region 595831	102 bp proximal
Rr595832	regulatory region 595832	1453 bp proximal