rs6330970 SNP Detail

Summary

• ID
  rs6330970
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39869517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCC CCAAATCAAC ATGAGCAAAG
  S
  TCGTATGATC TCACAGAGAC TGAAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8736970	WI_WGS_3_39702294	WI	MOUSE	f	SNP				G	C
ss45554896	mCV24783824	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G		C
ss134854700	ENSMUSSNP5251755	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C			C
ss320726603	CHEV_3_39714290	CHEVERUD	SCREENING_POP	f	SNP							G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6330970					SNP	C	C	C	G	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39869517 () rs orientation: forward

Symbol	Name	Function Class
Rr575773	regulatory region 575773	203 bp distal
Rr575774	regulatory region 575774	323 bp distal