rs6330742 SNP Detail

Summary

• ID
  rs6330742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:100279612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGCCTT CTGATCCTAG
  AAGAGGCTTC AAGATAGAAT GAGCATGATT TTATCCAAGA GGTGTTCATT AAGGTAGTGT
  CTTGAATGGC ACTGATACAC AACGTGCTGA GCGCTCGCTG GTGGGCAGAG TCCTGTGGTG
  ACTATTATGG GATGAAAAAG AAGATTTGAC TAGGATACTT GATAAAAGTT TTATAGAAAG
  R
  ACAGAGATGT AGCTCAGTTG GTGGAGTGTC TCCCTAGCAT GCGTGAAGCC CTGAGTTTGA
  TCTCTAGTTC TTCATAAACT GGATGGGGAC TGCAAACCTA CAATCCCAGA ACTGAGGAAA
  TAGAGGCAGG GAAATCTGAA GTTTGAGGTT ATCTTTGGCT ACACAGTAGC TGGGGTTGGG
  AAATGAAAAA GATGAAAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8736742	WI_WGS_6_101136024	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6330742					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:100279612 () rs orientation: forward

Symbol	Name	Function Class
Rr635619	regulatory region 635619	644 bp distal