rs6327505 SNP Detail

Summary

• ID
  rs6327505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:8982244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGTCAGA GGCACATGGA
  AGAATCCAGA GCAGGGAGAG AAAGTAGACG CAACATGGCC AGTAGACTGG ACCAGGTCAC
  GGAGGAGAGG AAGGGAGAGA GAGAGAGAAG GAGAGAGAAA GAGAGGAAGA CAAAGAGAGC
  TTAGGAAAAG GAGAACTAGA GAGAGGGAGC CAAGAGCAGA AGACTAGAGA GAAATGGTAG
  R
  GCTATAAAGG AATGAGAAGC TGGAGGAGGG AAGTTTACAC AGAGGACTGT GTGAGAAGTG
  CTGAGAAGGG CCACAATGCC AGGATGGACT CTACGCCAGG TACTTATGAT GCTGGGGGAG
  CTTTGGTATG CTAGTAGGCA CCACAGCCAT TTGTCCTAAG TTTCTTTTGG GTCTGACAGT
  GATACAAAAT TCCATTGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8733493	WI_WGS_4_8456472	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6327505					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8982244 () rs orientation: forward

Symbol	Name	Function Class
Rr588632	regulatory region 588632	1981 bp distal
Rr588633	regulatory region 588633	1893 bp proximal
Tssr40895	transcription start site region 40895	1974 bp upstream