rs6326921 SNP Detail

Summary

• ID
  rs6326921
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:114817587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCCCTGGG ACTCCTGGCA
  CAGAGCTCTG CACCTGTGTG CTTGCCTGGT CAGCCGTGGG GCCTGCAGGA GGACCAAAAT
  TCATGACCAT GCCAGAAAGC TTAGCATGGG ATGAACCATG CACTTAAGCA GGTCTGGGAA
  AGTTGATAAT CCATCTTCTC CACTATCCAC TAAGCTGCCT GCATTGCTGC TGTGCGCACA
  R
  CACAGAAGCA GCCCAGACGA ATGTGCTGGT CCCACAGAAC TGTTTGTCAC CACACCTTAC
  TCCTACTCTG TGATGGCTAG GGAGAGGAAC CCTGAGGAAT AGAGCATAAG TAACTTGTCC
  CAAGTCCATC AGCTAAGGGC CGGTAGAGCC AGGGTTCCGT GTGCTGAAAC CTCGAGACTA
  AAGCATCCCA CAGGGCTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8732909	WI_WGS_6_115621919	WI	MOUSE	f	SNP	A	G
ss321914866	CHEV_6_114790644	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6326921					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:114817587 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atg7	autophagy related 7			Intron
				Noncoding-Transcript-Variant
Gm67840	predicted gene, 67840			324 bp upstream
Rr636840	regulatory region 636840			1365 bp distal
Rr636841	regulatory region 636841			145 bp distal