rs6324937 SNP Detail

Summary

• ID
  rs6324937
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:6821370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TGATTCAAAT
  AAAGAATGTG GTTGAGAAGA AACAAGANNC AAAAGTCTNA AAGAAAACAA AGGTGAGGCC
  CTGTGAGCTG ACCAGAACCT CAGCTGTACC CACAAATTAC CTTAAGTCTG CCACAGAAAA
  TGAGATGANT CTGCTAGCGG TACANACAGA TTTAAGGAAA ACTGAAATAT CTTTNACCAG
  AACTAAAATA TAAACTCTAG GATGATATCC TGATGGAGTC TTCTCCAGAA GGAGCTGGCA
  S
  TCAGGCCTGC CATACACAGC AGCCACACAA GGTATTTTTC TGAACAAATG TATGAGTGTT
  TAGCATTTGT TGTAATACAA CTGAGTGACT ACAACTCCAA TGAACACAGC TCTACATTAC
  AATATTCATG TAGAGTGCAA AAGAACACAT CTTTTCTTCC TCTTTCTACC TAAGGTaaaa
  caaaacaana caanacaaaa caaaacaaca caaCAACCCC AAATGCCAAA TGTTGAAGCT
  CCACATTCAG                                                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8730924	WI_WGS_2_6824621	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6324937					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:6821370 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Celf2	CUGBP, Elav-like family member 2			Intron
				Noncoding-Transcript-Variant
Rr372727	regulatory region 372727			1268 bp upstream