rs6318275 SNP Detail

Summary

• ID
  rs6318275
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:51635937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         GCCTTTCCTC
  CCTCACCTAA CAAGGACAGA TGAAGGGTGG AGGATGGGTC CTGAGGTCCC ATGAAGGGTG
  CTAGAAACCC CGGCCAAAGC TTAGGGAGTA ATTTCCTAGA TAGGGCNCTT TCTAAATACA
  AGCAGCTTCC GTAAAATGAA TCGCCCGAAG TCCCAGTAAT CAATAGATTA TTTTTTTTTA
  ATAACACAAG ACAGAAATGG TCGNACTGCA CAGGACTTCA CACCAGTCCT GCTGACGAGT
  R
  NTGCTTCTGC CTGCTCCATC CTGGTCAGGA ACTGGTTATT TTTAGACATC CTTTAGCTGG
  CTTTCCCTTA TCAGCAGCCC CACACCCTGC TCACTCATGC TCCGCTGCAA AGTGCGCCTC
  CCACCCTCCC ACCCCCCACC CCATGCATAT GAACGGCGTG CTCAACGGCA TGGAAAAAGg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgcgtgCACA CGTGCGGAGC
  AGGCCACAGG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8724257	WI_WGS_3_52179667	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6318275					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51635937 () rs orientation: forward

Symbol	Name	Function Class
Maml3	mastermind like transcriptional coactivator 3	Intron
Rr576380	regulatory region 576380	within coordinates