rs6316258 SNP Detail

Summary

• ID
  rs6316258
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146993660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCAGCCAC ACCTCTGGCA
  TTCTTTTCCA GAGACTGAGA GCATTGATGA TGGGAGGGTG ATCAGTGATG GGAAAGACCG
  AGATTTGCTG GCAAGATGTC ATGCCCTCAG CATGGCTGTC ACTCTCCACG CAGAGAGGTG
  CTAAGGGGAG ATCAGAGGAG GCCGAGCTCT GAAAGTAGGG CGGTAGAAAG GGGTGGGTGT
  R
  GGAAGGACAA AGGGAAAACC ACGGAGGCTG TCAGACACTT GGTAAAGTTT ATGCTATTAG
  TTTCTTATTC CTGCCATGTA GCAGAGCCAA CCCAAGCTAA GCACAAGAAC GAGTCTCATA
  GCCCTGTGAG CTTCACAAGA GTGACTTTCT GGAACCGAAT CAGACGTTTC TAAGATTTCC
  TTTGGTTACG GTTTTTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8722234	WI_WGS_3_147824162	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6316258					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146993660 () rs orientation: forward

Symbol	Name	Function Class
Rr587143	regulatory region 587143	within coordinates