rs6315762 SNP Detail

Summary

• ID
  rs6315762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:51635421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TGTATATGGC
  ATTAAAATAC GCTGGGCCCA CACCAGACCT TTGGTCAGTT CTGGGGTCTA AAGAGGAAAT
  GGAAGGTTAA GTGTGAAAAA CTTGAGGGTA AGGGAAATGA CTTCAATCTC TAAAGTAAAA
  TTGCTTCATC TAACTGAAAC AAACAAACAA AAACTGTTCA GCATTAGCTA AAAACAAAAA
  CAAAACCCAA ATCCTGTTGA TGTGACTGGG TGCTGGACCA AGAGGGNATA TTTAGTGTCC
  Y
  ACGCCGTAGG GCTGCATCTT GAAGCCCAAC AGGAAGTATC TGGAGTCACA GCTAAAGATA
  TCTCTGCATG TTTGGAAATT TATGAGCAGC TGTAAAGTGG CTCGATGGTG GGCAGAGGGC
  TGGAACAGGC TTCCTTTCAA ATGAGAGAGG CCGCTGAATT AAACACTCAA ATACACCAGG
  TTCGTGGCAG GCGGAGCACA CCTGANATGC TAAAAATAGN CGCAGGAGAA GCTTCTGTTG
  CTAAAATAAT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8721736	WI_WGS_3_52179151	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6315762					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51635421 () rs orientation: forward

Symbol	Name	Function Class
Maml3	mastermind like transcriptional coactivator 3	Intron
Rr576380	regulatory region 576380	within coordinates