rs6314093 SNP Detail

Summary

• ID
  rs6314093
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60690508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAATGTTT TTGCACCTAC
  AGGGTTGCAG ATCTCTTTAG CAACTTGGAT ACTTTCTCTA GCTCCTTCAT TGGGGGCCCT
  GTGATCCATC CAATAGCAGA CTGTGAGCAT CCACTTCTGT GTTTGATAGG CCCAGGCTAG
  TCTCACAAGA GACAGCTATA TCAGGGTCCT TTCAGCAAAC ACTTGCTAGT CTCTGCTCCA
  Y
  ACTTTGTCTC TGTTAACTCC TTCCATAGGT ATTTTGTTCC CCTTCTAGGA AGGATCGAAG
  TATCCCCACT TTGTTCTTCC TTCTTCTTGA GTTTCATATG GTTTGCAAAT TGTATTTTGG
  GTATTCAGAG CTTCTGGACT AATATCCACT TATCAGTAAG TACATATCAT GTGTGTTCTT
  TTGTGATTGG GTTACCTCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8720064	WI_WGS_3_61369915	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6314093					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60690508 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577455	regulatory region 577455	434 bp distal
Rr577456	regulatory region 577456	within coordinates
Rr577457	regulatory region 577457	1377 bp proximal