rs6312014 SNP Detail

Summary

• ID
  rs6312014
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95988263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAATATAT TGTAATGCAA
  TTTTAAAAAG ATGAAATTTA ACTTCTGTCC CAATAAAAGT TACTGTAGCA GAATAAGGCC
  CTCTCCTCAT CTCACTGAAC CACTTATACA AAACTTTTCT TGTCAGGTAT GGTAGTACAT
  ACTTTGGATC CCGACACGAG GAAGGCAGAG GCAGGTGGCT CTCCAGGAGT TTGAGGCCTG
  S
  CTGGTCTATA TAGGAAGTTA TTTCCAGGAT AGCCAGGGAT ACATAGTGAG ATCATCCTGT
  CTCAAAACAC AACAACAACA ACAACAACAA CAACAACAAC AACAACAACA TCCCAAACAA
  ACCAACCCAA AAAGCCCCAA ACAAATCACA AAACAACAAC AACCTCCTCC CACAAAACAA
  TAACAAAAGC TTCCCTTTAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8717975	WI_WGS_3_96374301	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6312014					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95988263 () rs orientation: forward

Symbol	Name	Function Class
Rr581136	regulatory region 581136	154 bp proximal
Rr581137	regulatory region 581137	241 bp proximal