rs6311993 SNP Detail

Summary

• ID
  rs6311993
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60690119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         tgctccatcc
  aatggatggc tgtgagcctc cacttctgta tttgtcaggc actggcagag cctctcagta
  gatagctata tcaggctcct gtcagcacgc tttcattggc atccacaata gtgtctgggt
  ttggtggttg tttataggat ggatccctgg gtggggcatt ctctggctat catttcttTT
  Tttttttttt taatattttt tattacgtat tttcctcaat tacatttcca atactatccc
  M
  aaagtccccc ataccctcgc ccccactccc ctacccaccc attcccacnt tttggccctg
  gcgttcccct gtactggggc atataaagtt tgcttgtcca atgggcctct ctttgcggtg
  atggccgatt aggccatctt ttgatacata tgcagctaga gtcaagagct caggggtact
  ggttagttca taatgttttt gcacctacag ggttgcagat ctctttagca acttggatac
  tttctctagc                                                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8717954	WI_WGS_3_61369526	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6311993					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60690119 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577455	regulatory region 577455	45 bp distal
Rr577456	regulatory region 577456	221 bp proximal
Rr577457	regulatory region 577457	1766 bp proximal