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rs6304119 SNP Detail
Summary
  • ID
    rs6304119
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr6:83459381 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GTGAGAGCCA CTCTACTTAT
    AAAGTGGTAA GCAATTTGAA ACATCTCTAG ATCAAGCACT CACTCTGGAG TAGATGAAAC
    ATCTGCATAA GTCAAATGAA ATGAATCAAA TGAAACCTGA GTCTTGACAT GAAGGCCCCT
    CTCCCTGCCC CTTTGCAGAG CTTCACTCTG CCTCCACCTG CAGGTCTGAG GGTCTCTGCC
    Y
    CTGAGAACTG TGATTCCTTG CCACAGCACA TAAGGCCACA GTACTTGTCC TCAACTTCCT
    TAGTCCCTCC CTTGCTCATG GCTTTGGCCA GATTTGGCCT CCTTCCTGTG GGACAAGCCA
    AGCCCCTTCA CACTTCAAAA CCTCTGCTCC AAATGTTTGT TTTGCCTGAA TTGCCCTTGT
    TCCTCTTTCT GCCTGGTCAA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
ss8710052 WI_WGS_6_84371353 WI MOUSE f SNP C T
ss51354739 NES13746637 PERLEGEN MM_PANEL2 f SNP C C C C C C C C T T C C T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
rs6304119 SNP C C C C C C C C T C T T C C T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51354739 NES13746637 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr6:83459381 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Dguok deoxyguanosine kinase Intron
Noncoding-Transcript-Variant
Rr632876 regulatory region 632876 12 bp distal
Rr632877 regulatory region 632877 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory