rs6299330 SNP Detail

Summary

• ID
  rs6299330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106547123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ACACACACAC
  ACAGGGCTTG GGGGGAGTAC TGAGAGAGTA AAAATAGATT atagataggt agacagacag
  acagacagac agacagatag atagatagat agaatataga taatggatag atatagatga
  tatataaaag atgatagata atgggtagat gatagaagat tgatggataT AGATgataga
  tagatagata gatagataga tagatagaca gatagataga taacagatgg atngatagat
  R
  gatggatgga tagatagata atagatggat aggtagatga tagatagata gatagataga
  tagatagata gatagataga tagatagata gatagataga tagatagaTC TTCAGCAGCT
  TGGTAGCCAT TGGCGTTATA TAGTGATTCA GAGGACAGGG AATCTAGACG AGAAGTGAGA
  GATGGAGACA GATGCTCAAG ACCCAACGGC TTGTAGAACC GCCAGTCAGA GTGTGAAGCA
  AGGATTCCAA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8705247	WI_WGS_4_104407047	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6299330					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106547123 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			748 bp distal