rs6294808 SNP Detail

Summary

• ID
  rs6294808
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:124772126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTACATGT GGATTGGTAG
  ATTAATCACT CTTCAAATTT CTTTCATCTT TGGAGCATTT GCTTCGGAAC TCTAAAGTGT
  ATGTATATAT AAACCCCATT GAACCAAAAT TTTAAATACT CTTTTTAAAA GAAACAAGAA
  AAGAAGTCAG ATTTTCAATG TAGTTGGTGC TAGAAAAGAA ACTTCAATAT GAGAAGCCAT
  R
  CTGAGAACTG TGATGTTAAA TGCTGTCACA ACAATGAGTG ACATTGAGGA TTAGAGTTGT
  TTTCCAAGAG GCCAAAGAGT TGGTCAGAGG TCTGAAGTTA CCCCTAGTTT CCTGCTTTCA
  CATAGGAGGT GTGATCATCT AAAAGTGGTG TGCAGGACTC TGAGGCCAAG GAACCATTCC
  TTTATGTGAG GCTTCCCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8700704	WI_WGS_2_125916304	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6294808					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:124772126 () rs orientation: forward

Symbol	Name	Function Class
Rr564149	regulatory region 564149	1424 bp distal
Rr564150	regulatory region 564150	1524 bp distal