rs6292991 SNP Detail

Summary

• ID
  rs6292991
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117224037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGACTTCA GAAACCAAAA TACAACACAG TTGGATTTTT
  GACACATCAT GACTATTTTT TTTTGGGGGG GGGGGAGGAA AGTGTTTATT CGGCTTACAC
  Y
  TCCATACTGC TGTTCATCAC CAAGGAAGTC AGGACTGGAA CTCAAGCAGG TCAGAAAGCA
  GGAGCTGATG CAGAGGCCAT GGAGGGATGT TCTTTACTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8698886	WI_WGS_3_117773210	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6292991					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117224037 () rs orientation: forward

Symbol	Name	Function Class
D3Mit299	DNA segment, Chr 3, Massachusetts Institute of Technology 299	1653 bp proximal
D3Mit299.1	DNA segment, Chr 3, Massachusetts Institute of Technology 299.1	1530 bp proximal
Gm66094	predicted gene, 66094	within coordinates