rs6291815 SNP Detail

Summary

• ID
  rs6291815
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:56491434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGAATGA CAGTATTGAG
  TTGAAGAGAT GGCTCAGTGT GAAAAGCATT GGCTGCCCTT TCTGAGGTCC TGAGTTTAAA
  TCCCAGCATC CACACAGTGA CTCACAACCA TCTGTAATGG GATCTGATGC CCTCTTCTGG
  TGTGTCTGAA GACAGAATAT AATGTATTCA TACATACATA CATTAAATAA ATAAATCTTT
  W
  AAAAAATGAC AGTGTTATTT AAATCCCTAG GAAATCGGGA TCTTATCAGA AATACAATAA
  AAAATGGTCA GACATAGCAA GAAACAGTAA ACACAAGACA GCTACTCAAG AAAAAAGAAT
  GACGCTCATA GATGAGGCGG TATATTTAAG AATTTAAGGT AGATTTAACA TGGAGATTTA
  CCCTTGGATT TTTTTATATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8697709	WI_WGS_13_55830483	WI	MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6291815					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:56491434 () rs orientation: forward

Symbol	Name	Function Class
Gm24716	predicted gene, 24716	1093 bp upstream
Rr480711	regulatory region 480711	704 bp distal
Rr480712	regulatory region 480712	763 bp proximal