rs6291031 SNP Detail

Summary

• ID
  rs6291031
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155689052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCAATGTG GGTTAAATAA
  CCTACAAGTT CTTTTTTTGT TTGTTTGTTT GGTTGGTTGG TTGGTTGGTT TTTCGAGACA
  GGGTTTCTCT GTGTAGCTCT GGCTGTCCTG GAACTCATTT TGTAGACCAG GCTGGCCTCG
  AACTCAGAAA TCCGCCTGCC TCTGCCTCCC GAGTGCTGGG ATTAAAGGCG TGTGCCACCA
  M
  ACCCGGCTCA CCTACAAGTT CTTAAATGCA GGCAGCTTGT TGCTGCTGGT GGTCTTCAGC
  TTCTTGCAGG CTAAGACCTT CTTTTCTTTG TAATTGATGC AAATTGTGGT CAGGGAATTG
  GACCAGGACT GGGTGGGTGA GTCAGACTCT GCCAGCATTA GAGCTGAGTA GCCCTTGGTT
  CATCTATAAA GCCAAACTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8696923	WI_WGS_4_151056160	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6291031					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155689052 () rs orientation: forward

Symbol	Name	Function Class
Rr606519	regulatory region 606519	1467 bp distal
Rr606520	regulatory region 606520	532 bp distal
Slc35e2	solute carrier family 35, member E2	Intron