rs6290367 SNP Detail

Summary

• ID
  rs6290367
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155688899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGCCAGT GGAAAGGAAG
  TTATGAGTTA GTTTTTCATC TGTTCTTCTG AATGTAGTTT ATAATTTGAG AGGGGCACGG
  TGACTTAATA CCTTTACGGT AGAGTGGCTG TTCTACACCA CAAGTTCAGG GTCAGCAGCT
  GTAACCAGCT TCAGGCCAAT GTGGGTTAAA TAACCTACAA GTTCTTTTTT TGTTTGTTTG
  K
  TTGGTTGGTT GGTTGGTTGG TTTTTCGAGA CAGGGTTTCT CTGTGTAGCT CTGGCTGTCC
  TGGAACTCAT TTTGTAGACC AGGCTGGCCT CGAACTCAGA AATCCGCCTG CCTCTGCCTC
  CCGAGTGCTG GGATTAAAGG CGTGTGCCAC CAAACCCGGC TCACCTACAA GTTCTTAAAT
  GCAGGCAGCT TGTTGCTGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8696258	WI_WGS_4_151056007	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6290367					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155688899 () rs orientation: forward

Symbol	Name	Function Class
Rr606518	regulatory region 606518	1998 bp distal
Rr606519	regulatory region 606519	1314 bp distal
Rr606520	regulatory region 606520	379 bp distal
Slc35e2	solute carrier family 35, member E2	Intron