rs6286410 SNP Detail

Summary

• ID
  rs6286410
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:76385545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TAGGTCCCCT
  TTATTATTGT CACCTGCATT TCTACCCAGT TCGAACATTT TTGTCTTCNT TAGATCTTGC
  ACACTGCCAG TCAAACCTTG TGGAACTTAG CAAGCTCCTG CAAAACTTGG AGATCCTTCA
  GAGAACTCAG TCGGCGCCTA ACTTCACTGA CATGCAGGTA AAGAAATGTA ACTGCTGCTG
  GTAACACTGT ATGAGATNCT AATTTACAAC CTTCACTGTC CTATGAAGAT GCAAGGAGAC
  R
  CTCAAAAGGG AAGTTACTAT TCACAGGCTC ACGTTACAAT ATTTACAATA ATATATAGTT
  TATATTCTGG AGTTACttat ttaatgttta tttgtgtttt acctactgta tatgtgtgca
  ccatgtgtgt gcagtagctg tgcagtcccg aagaaggcat tggattcttc taggcgtaac
  aataggtaac cacttattgt tgttgtgagc tgctttgtgg gtgctgggaa tcaaacctgt
  gtcctctgTA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8692288	WI_WGS_2_77425288	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6286410					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76385545 () rs orientation: forward

Symbol	Name	Function Class
Osbpl6	oxysterol binding protein-like 6	Intron
Rr559696	regulatory region 559696	1047 bp proximal