rs6284882 SNP Detail

Summary

• ID
  rs6284882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106546862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         cttagtctat
  agagggagtt ccaggacagc cagggctaca cagagaaacc ttgtctcaaa aataaaataa
  aATGTTTAAA AAAGGAAAAG AAAGGGGAGA CACTTTAGGC AGAAGATACA GTACAGCTNg
  gctgnagctg taactcagtg atagagcacc tgcctagcat gcatgaggtc acggattcag
  tccctaCCTa cacacacaca cacacacaca cacacacaca cacacacaca cacacacana
  Y
  acacacatac acacacacac acaGGGCTTG GGGGGAGTAC TGAGAGAGTA AAAATAGATT
  Atagataggt agacagacag acagacagac agacagatag atagatagat agaatataga
  taatggatag atatagatga tatataaaag atgatagata atgggtagat gatagaagat
  tgatggatat agatgataga tagatagata gatagataga tagatagaca gatagataga
  TAACAGATGG                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8690755	WI_WGS_4_104406786	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6284882					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106546862 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			487 bp distal