rs6279818 SNP Detail

Summary

• ID
  rs6279818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:53458422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAAATAAT TAACAAATGC
  TGACATATTT TTTTTCTCTT TTCAGCCTTG TCAGGTTAGT TACATACAAG GTCATATTCT
  GATAGCAAAG GTGGCACCTA GAAATTTTCT GCCCCAAGCA CTGGTCAGAC AGTATAATAA
  TACAACAATT ATTCCATTTT ATGTACATAT AAGAACTGGA AAAGGAGCAC TAAAGTAATG
  R
  TTTGTCTTCA TTATTGACAC TTATGTGGTA TTCAGAGTAT AATTCTTATC CTAAAATCAC
  TTTTTGTTTG CAGTTACAAC ATACAATAGC ATAAACGATA GTATCCTGTA ATTGGAGACA
  TTTCTAACTG TACCTGTCAT GTGTTAGCTG TTACTGGAAT TTTTTCCAAT TGATTTAACC
  TTGGCTGCAT AAATTTAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8685667	WI_WGS_8_52234380	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6279818					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:53458422 () rs orientation: forward

Symbol	Name	Function Class
Gm23666	predicted gene, 23666	1021 bp upstream