rs6279294 SNP Detail

Summary

• ID
  rs6279294
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:53458312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTCTTTG GAGGAGGATG
  TGGGAGTGAG CAGGACTGAC AATTTGCCTT TCATCTAAAT ATTATTAAAA TTACTGCATA
  TTTTGTTTCA AATTTTTAAA AATGCATTGC TTCAAATAAT TAACAAATGC TGACATATTT
  TTTTTCTCTT TTCAGCCTTG TCAGGTTAGT TACATACAAG GTCATATTCT GATAGCAAAG
  R
  TGGCACCTAG AAATTTTCTG CCCCAAGCAC TGGTCAGACA GTATAATAAT ACAACAATTA
  TTCCATTTTA TGTACATATA AGAACTGGAA AAGGAGCACT AAAGTAATGA TTTGTCTTCA
  TTATTGACAC TTATGTGGTA TTCAGAGTAT AATTCTTATC CTAAAATCAC TTTTTGTTTG
  CAGTTACAAC ATACAATAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8685139	WI_WGS_8_52234270	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6279294					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:53458312 () rs orientation: forward

Symbol	Name	Function Class
D8Mit230	DNA segment, Chr 8, Massachusetts Institute of Technology 230	317 bp proximal
Gm23666	predicted gene, 23666	1131 bp upstream