rs6278433 SNP Detail

Summary

• ID
  rs6278433
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29866838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTCTCTG AGCCATCTCC
  CTCCTGGTCT GGTTCAGTTG CTTTCTCCTC AACTAACTAC TCTTTGCCTC CTGAGGTAGG
  CTTTAAGTTC CCAGTGGATG TTTTTCTTCC CTCCCCTGTG AAATCACATG AATCTAGGCT
  GGGTGGGGGC AGGGGAGGAG TATGGTAGGC TCTGAACAAG CCCAACCTCA CTGGTGGGAG
  R
  AATGGTCCCG TAAATCCTTT CAAAGGGCGC CCACCATGTC TGAGAGTCGG AAGGGGCAGC
  CGGTGACATG AATACGATTA TTGTAATGGA GCAAAATGTG TGACCCGACC GGATTCGGTA
  AACCCAGCAA AAGGGAACGG CACAGTTAAC CCGTGTCTTG GGGGAGCACT AAACCTGGAG
  CAGACTTATT AATTAGAGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8684274	WI_WGS_3_29624861	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6278433					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29866838 () rs orientation: forward

Symbol	Name	Function Class
Gm33206	predicted gene, 33206	within coordinates
Gm65557	predicted gene, 65557	within coordinates
Rr574687	regulatory region 574687	44 bp distal
Rr574688	regulatory region 574688	within coordinates
Rr574689	regulatory region 574689	392 bp proximal