rs6275753 SNP Detail

Summary

• ID
  rs6275753
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29794102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AGCATCTCTG
  GCGTGTTCTC CTCCTAAGCC CCAGACACAG CCAGTGTTAA AATGTATAAT ATCACCCACC
  CTCCAGATCC AAGCGCAGGA CACTTTCACA TAAATATGAC TTACAAAACA CTCCGTGTTA
  CGTGTTCACT CATTCAGTTA TGCACACATG TGATATCAGT CTGCCAAGAC CTGCCTTTCC
  CACACACTGT TGCCTGTTTC TGTGATGATT TGTTTACTAA ATCAACTACA GCTGATGTTC
  R
  GGACTCNCTC AATACTTTCT ATTCCGAACA GAATGACTGA ACATTTTCAT AGATTTCCTT
  TGCTATTTTT TCCTAGTTGC TGAACTGAAA GGCTTGTTAG CTAAAATTTA TTATATGAGC
  CATAATTTAT TAGTAGCTAT AGTCAATATT ATAAGCCATG CCCATGCTCC AAACAGAAGT
  TCTCACCGGT TTACACTCCT CCTAGGAGTG TGGGTGAGGT TGGACCTTTG AGACCTGAAA
  AACATGGAGC                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8681580	WI_WGS_3_29552105	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6275753					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29794102 () rs orientation: forward

Symbol	Name	Function Class
Gm65548	predicted gene, 65548	within coordinates
Rr574683	regulatory region 574683	369 bp distal
Rr574684	regulatory region 574684	443 bp distal