rs6273123 SNP Detail

Summary

• ID
  rs6273123
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4813502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTC CAAGACCCAG ATATATGATG
  S
  ATTCTAATCC TCACTTTCCA GAGGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8678947	WI_WGS_6_4519314	WI	MOUSE	f	SNP	C	G
ss45889171	mCV24792329	ABI	CRAMUS_MOUSE	f	SNP	C		G
ss132932804	ENSMUSSNP3999741	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
ss321727873	CHEV_6_4763502	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6273123					SNP	C	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4813502 () rs orientation: forward

Symbol	Name	Function Class
Gm20714	predicted gene 20714	within coordinates
Rr626062	regulatory region 626062	1727 bp distal
Rr626063	regulatory region 626063	within coordinates