rs6273037 SNP Detail

Summary

• ID
  rs6273037
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102277469 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTTCCTA GCTACAGTTG
  TAGTTAGAAG GCTGAGAAGT GTCGAGATGT GCTAAAATCA TTTGTTTTTC TTTCCGACTT
  GAAGACAGAA GGGTGAGCAT ACTTAATAGA GTTTAGAACT GTGTCACCAA CAGAGTGAAT
  TAATCAACAG TCAAACCCAA GGAGAAAGGT CAACTGCCTA CTTTCTCTTG GCAGAAGAAA
  S
  TGGGAAGAGG ATTGTTCTTG CAAAGATTCA TCACTTTTTG ATGCTTTCCA GAAGTGGTGA
  TGGATTTGCA ATGAGCCGTC TCTCTTAGTT TTTTTCTTTT TTAATCTCTC ATGTATTTGG
  GTCCAGCTGC CTTGGTACAG GGATGTGCTG ATTTCTGAAA ACACCCCCTT AAAACCATGT
  GGAGATCAAA CCTGTGCCCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8678861	WI_WGS_2_103268350	WI	MOUSE	f	SNP	G	C
ss320437726	CHEV_2_102287281	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6273037					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102277469 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	700 bp proximal