rs6271506 SNP Detail

Summary

• ID
  rs6271506
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4813245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTTTATA CAGACTTAAT
  CACATTTCAA CCTCTAGGGG AAATGCTAAA TGAAGCAATA ATTACTTTGT TCTTCTCAAT
  TCTTCTGCCA CCCTCGGCTT TTCTGATGCT GGAGATTGCT GGTCTCGAAG TTAAAAAGCA
  GAGCTACATA GGTAAGATGT CCCACCCCAA GAAAATGATT TGGGTCTTTT AGATGCCCTA
  R
  GTGAAAATAC AAAGAATGGG TTAATGCAGG GCTGGGGAGT AGAATTTCTC CCTTCAAAAA
  GTATCTGCAA TAAGATGCTT ACGTCTGGCC GGTTTCCACA CTGCTGACCC TCTTCCTGTC
  AGAGGGCTGT GTCCATTCCC TGGTGCCCTA TCCCAGGGCA AAAGGCCAAG CATTCATTGG
  CTATGATTAG AGTTGTTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8677327	WI_WGS_6_4519057	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6271506					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4813245 () rs orientation: forward

Symbol	Name	Function Class
Gm20714	predicted gene 20714	within coordinates
Rr626062	regulatory region 626062	1470 bp distal
Rr626063	regulatory region 626063	within coordinates