rs6268651 SNP Detail

Summary

• ID
  rs6268651
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95842829 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCACGTGG TACATGGAAA
  GAACCCACAA CTGAAAGTTA CTCTCTGTCA CACACATGAA TGCTTATGGA ATATGCGTGC
  ATCTCCCTGC TCAATATAAT TAAAATGTAT AATAAATAAA AAATAAAAGT CCCCGGGCCG
  TGGTGGCGCA TGCCTTTAAT CCCAGCGCTC GGGAGACAGA GGCAGGCGGA TTTCTGAGTT
  Y
  GAGGCCAACC TGGTCTACAA AGTGAGTTCC AGGACAGCCA GGGCTATACA GAGAAACCCT
  GTCTCGAAGA AAGAAGAAGA AGAAAAAAAA AAGGCAAAAA GAAAAACAAA ACCCGGGCTG
  GTGAGATGGC TCAGTGAGTA AGAGCACCCA ACTGCTCTTC CGAAGGTCCA GAGTTCAAAT
  CCCAGCAACC ACATGGCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8674468	WI_WGS_3_96221091	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6268651					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95842829 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	Intron
Rr581091	regulatory region 581091	506 bp proximal
Tssr30659	transcription start site region 30659	1495 bp downstream
Tssr30660	transcription start site region 30660	681 bp downstream
Tssr30661	transcription start site region 30661	1626 bp upstream