rs6257179 SNP Detail

Summary

• ID
  rs6257179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4812871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTAAATA AATATTGATC
  ATTACCACTT AAATCTAACT TACTAGTCTT CACTGGAAAT AGGATCCTTC GTCCGATGCT
  TTTGACTTCT ACCATTGATG CTCAGATCTC CTGGCTCTAG TTTGGTACTT GACTGTGACA
  GCTTTCTCCA CCTTTCTTTT CTTCTTTGAT TCTTCTAGTC GGCATTAGAC TTGAATTTAC
  R
  TCTTCCATTC AAGAACCTAC ATTTTCACAG GAAAATTAAA CAAAATGAAT GAATCGTCTT
  TGTGTTGTTC CAACCAGACT ATTTTGTATT TATCCTTCAG CATCTTTTAT TATGTGTATC
  TCCTTTTAGT TTTTCCATAT AATTTTAAAA CTAGATTTCC TCTTTTGTCA CTTATTCTTT
  ATACAGACTT AATCACATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8662962	WI_WGS_6_4518683	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6257179					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4812871 () rs orientation: forward

Symbol	Name	Function Class
Gm20714	predicted gene 20714	within coordinates
Rr626062	regulatory region 626062	1096 bp distal
Rr626063	regulatory region 626063	274 bp proximal