rs6257170 SNP Detail

Summary

• ID
  rs6257170
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4812860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTAGTTA TTTGCTAAAT
  AAATATTGAT CATTACCACT TAAATCTAAC TTACTAGTCT TCACTGGAAA TAGGATCCTT
  CGTCCGATGC TTTTGACTTC TACCATTGAT GCTCAGATCT CCTGGCTCTA GTTTGGTACT
  TGACTGTGAC AGCTTTCTCC ACCTTTCTTT TCTTCTTTGA TTCTTCTAGT CGGCATTAGA
  S
  TTGAATTTAC GTCTTCCATT CAAGAACCTA CATTTTCACA GGAAAATTAA ACAAAATGAA
  TGAATCGTCT TTGTGTTGTT CCAACCAGAC TATTTTGTAT TTATCCTTCA GCATCTTTTA
  TTATGTGTAT CTCCTTTTAG TTTTTCCATA TAATTTTAAA ACTAGATTTC CTCTTTTGTC
  ACTTATTCTT TATACAGACT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8662953	WI_WGS_6_4518672	WI	MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6257170					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4812860 () rs orientation: forward

Symbol	Name	Function Class
Gm20714	predicted gene 20714	within coordinates
Rr626062	regulatory region 626062	1085 bp distal
Rr626063	regulatory region 626063	285 bp proximal